<?xml version="1.0"?>
<!DOCTYPE INSDSet PUBLIC "-//NCBI//INSD INSDSeq/EN" "http://www.ncbi.nlm.nih.gov/dtd/INSD_INSDSeq.dtd"[]>
<INSDSet>
  <INSDSeq>
    <INSDSeq_locus>CLSWS2OP5</INSDSeq_locus>
    <INSDSeq_length>430</INSDSeq_length>
    <INSDSeq_strandedness>double</INSDSeq_strandedness>
    <INSDSeq_moltype>DNA</INSDSeq_moltype>
    <INSDSeq_topology>linear</INSDSeq_topology>
    <INSDSeq_division>VRT</INSDSeq_division>
    <INSDSeq_update-date>17-DEC-1999</INSDSeq_update-date>
    <INSDSeq_create-date>09-JUN-1999</INSDSeq_create-date>
    <INSDSeq_definition>Columba livia SWS2 opsin (sws2) gene, exon 5 and complete cds</INSDSeq_definition>
    <INSDSeq_primary-accession>AF149242</INSDSeq_primary-accession>
    <INSDSeq_accession-version>AF149242.1</INSDSeq_accession-version>
    <INSDSeq_other-seqids>
      <INSDSeqid>gb|AF149242.1|CLSWS2OP5</INSDSeqid>
      <INSDSeqid>gi|5020190</INSDSeqid>
    </INSDSeq_other-seqids>
    <INSDSeq_segment>5 of 5</INSDSeq_segment>
    <INSDSeq_source>Columba livia (rock pigeon)</INSDSeq_source>
    <INSDSeq_organism>Columba livia</INSDSeq_organism>
    <INSDSeq_taxonomy>Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Testudines + Archosauria group; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba</INSDSeq_taxonomy>
    <INSDSeq_references>
      <INSDReference>
        <INSDReference_reference>1</INSDReference_reference>
        <INSDReference_position>1..430</INSDReference_position>
        <INSDReference_authors>
          <INSDAuthor>Kawamura,S.</INSDAuthor>
          <INSDAuthor>Blow,N.S.</INSDAuthor>
          <INSDAuthor>Yokoyama,S.</INSDAuthor>
        </INSDReference_authors>
        <INSDReference_title>Genetic analyses of visual pigments of the pigeon (Columba livia)</INSDReference_title>
        <INSDReference_journal>Genetics 153 (4), 1839-1850 (1999)</INSDReference_journal>
        <INSDReference_pubmed>10581289</INSDReference_pubmed>
      </INSDReference>
      <INSDReference>
        <INSDReference_reference>2</INSDReference_reference>
        <INSDReference_position>1..430</INSDReference_position>
        <INSDReference_authors>
          <INSDAuthor>Yokoyama,S.</INSDAuthor>
        </INSDReference_authors>
        <INSDReference_title>Direct Submission</INSDReference_title>
        <INSDReference_journal>Submitted (10-MAY-1999) Department of Biology, Syracuse University, 130 College Place, Syracuse, NY 13244, USA</INSDReference_journal>
      </INSDReference>
    </INSDSeq_references>
    <INSDSeq_feature-table>
      <INSDFeature>
        <INSDFeature_key>source</INSDFeature_key>
        <INSDFeature_location>1..430</INSDFeature_location>
        <INSDFeature_intervals>
          <INSDInterval>
            <INSDInterval_from>1</INSDInterval_from>
            <INSDInterval_to>430</INSDInterval_to>
            <INSDInterval_accession>AF149242.1</INSDInterval_accession>
          </INSDInterval>
        </INSDFeature_intervals>
        <INSDFeature_quals>
          <INSDQualifier>
            <INSDQualifier_name>organism</INSDQualifier_name>
            <INSDQualifier_value>Columba livia</INSDQualifier_value>
          </INSDQualifier>
          <INSDQualifier>
            <INSDQualifier_name>mol_type</INSDQualifier_name>
            <INSDQualifier_value>genomic DNA</INSDQualifier_value>
          </INSDQualifier>
          <INSDQualifier>
            <INSDQualifier_name>db_xref</INSDQualifier_name>
            <INSDQualifier_value>taxon:8932</INSDQualifier_value>
          </INSDQualifier>
        </INSDFeature_quals>
      </INSDFeature>
      <INSDFeature>
        <INSDFeature_key>gene</INSDFeature_key>
        <INSDFeature_location>order(AF149238.1:&lt;46..452,AF149239.1:1..272,AF149240.1:1..333,AF149241.1:1..557,1..&gt;301)</INSDFeature_location>
        <INSDFeature_intervals>
          <INSDInterval>
            <INSDInterval_from>46</INSDInterval_from>
            <INSDInterval_to>452</INSDInterval_to>
            <INSDInterval_accession>AF149238.1</INSDInterval_accession>
          </INSDInterval>
          <INSDInterval>
            <INSDInterval_from>1</INSDInterval_from>
            <INSDInterval_to>272</INSDInterval_to>
            <INSDInterval_accession>AF149239.1</INSDInterval_accession>
          </INSDInterval>
          <INSDInterval>
            <INSDInterval_from>1</INSDInterval_from>
            <INSDInterval_to>333</INSDInterval_to>
            <INSDInterval_accession>AF149240.1</INSDInterval_accession>
          </INSDInterval>
          <INSDInterval>
            <INSDInterval_from>1</INSDInterval_from>
            <INSDInterval_to>557</INSDInterval_to>
            <INSDInterval_accession>AF149241.1</INSDInterval_accession>
          </INSDInterval>
          <INSDInterval>
            <INSDInterval_from>1</INSDInterval_from>
            <INSDInterval_to>301</INSDInterval_to>
            <INSDInterval_accession>AF149242.1</INSDInterval_accession>
          </INSDInterval>
        </INSDFeature_intervals>
        <INSDFeature_operator>order</INSDFeature_operator>
        <INSDFeature_partial5 value="true" />
        <INSDFeature_partial3 value="true" />
        <INSDFeature_quals>
          <INSDQualifier>
            <INSDQualifier_name>gene</INSDQualifier_name>
            <INSDQualifier_value>sws2</INSDQualifier_value>
          </INSDQualifier>
        </INSDFeature_quals>
      </INSDFeature>
      <INSDFeature>
        <INSDFeature_key>mRNA</INSDFeature_key>
        <INSDFeature_location>join(AF149238.1:&lt;46..430,AF149239.1:83..251,AF149240.1:132..297,AF149241.1:171..410,164..&gt;301)</INSDFeature_location>
        <INSDFeature_intervals>
          <INSDInterval>
            <INSDInterval_from>46</INSDInterval_from>
            <INSDInterval_to>430</INSDInterval_to>
            <INSDInterval_accession>AF149238.1</INSDInterval_accession>
          </INSDInterval>
          <INSDInterval>
            <INSDInterval_from>83</INSDInterval_from>
            <INSDInterval_to>251</INSDInterval_to>
            <INSDInterval_accession>AF149239.1</INSDInterval_accession>
          </INSDInterval>
          <INSDInterval>
            <INSDInterval_from>132</INSDInterval_from>
            <INSDInterval_to>297</INSDInterval_to>
            <INSDInterval_accession>AF149240.1</INSDInterval_accession>
          </INSDInterval>
          <INSDInterval>
            <INSDInterval_from>171</INSDInterval_from>
            <INSDInterval_to>410</INSDInterval_to>
            <INSDInterval_accession>AF149241.1</INSDInterval_accession>
          </INSDInterval>
          <INSDInterval>
            <INSDInterval_from>164</INSDInterval_from>
            <INSDInterval_to>301</INSDInterval_to>
            <INSDInterval_accession>AF149242.1</INSDInterval_accession>
          </INSDInterval>
        </INSDFeature_intervals>
        <INSDFeature_operator>join</INSDFeature_operator>
        <INSDFeature_partial5 value="true" />
        <INSDFeature_partial3 value="true" />
        <INSDFeature_quals>
          <INSDQualifier>
            <INSDQualifier_name>gene</INSDQualifier_name>
            <INSDQualifier_value>sws2</INSDQualifier_value>
          </INSDQualifier>
          <INSDQualifier>
            <INSDQualifier_name>product</INSDQualifier_name>
            <INSDQualifier_value>SWS2 opsin</INSDQualifier_value>
          </INSDQualifier>
          <INSDQualifier>
            <INSDQualifier_name>transcription</INSDQualifier_name>
            <INSDQualifier_value>ATGCAGAGGGCGCGTGAGGCGCGCGACGAGCTCCCCGACGACTTCTACATCCCCATGGCGCTGGACGCGCCCAACCTGACGGCGCTGAGCCCGTTCCTGGTGCCGCAGACGCACCTGGGCAGCCCCGGCGTGTTCCGCGGCATGGCGGCGTTCATGCTGGCGCTGATCGCGCTGGGGGGGCCCATCAACGCGCTCACCATCGCCTGCACCGCGCGCTACAAGAAGCTGCGCTCGCACCTCAACTACATCCTGGTGAACCTGGCGGCCGCCAACCTGCTGGTGATCTGCGTGGGCTCCACCACCGCCTTCTACAGCTTCTCGCAGATGTACTTCGCGCTGGGGCCCACGGCGTGCAAGATCGAGGGCTTCGCCGCCACGCTCGGGGGCATGGTGTCGCTGTGGTCGCTGGCCGTGGTGGCCTTCGAGCGGTTCCTGGTGATCTGCAAGCCGCTGGGCAACTTCACGTTCCGCGGCAGCCACGCGGTGCTGGGCTGCGCCGCCACCTGGATCTTCGGCCTCGTGGCCGCCGTGCCGCCGCTCTTCGGCTGGAGCAGGTACATCCCCGAGGGGCTGCAGTGCTCGTGCGGGCCCGACTGGTACACGGCCAACAACAAGTGGAACAACGAGTCCTACGTCATCTTCCTCTTCTGCTTCTGCTTCGGGGTCCCCCTGGCCCTCATCGTCTTCTCCTACGGACGCCTGCTGCTCACGCTCCGCGCGGTGGCCCGGCAGCAGGAACAGTCGGCCAGCACGCAGAAGGCGGAGCGCGAGGTGACCAAGATGGTGGTGGTGATGGTGCTGGGCTTCCTGGTGTGCTGGGCGCCCTACTCGGCCTTCGCGCTCTGGGTGGTGACGCACCGCGGCCGCCCCTTCGACGTGGGGCTGGCGTCCATCCCCTCCGTGTTCTCCAAGGCCTCCACCGTCTACAACCCCGTCATCTACGTCTTCATGAACAAACAGTTCCGCTCGTGCATGCTGAAGCTGCTGTTCTGCGGGCGCAGCCCGTTCGGGGACGAGGACGACGTGTCGGGCTCCTCCCAGGCCACCCAGGTGTCCTCCGTGGGCTCCGCCTCCGCCAGCCAGGTGGCCCCGGCATAG</INSDQualifier_value>
          </INSDQualifier>
        </INSDFeature_quals>
      </INSDFeature>
      <INSDFeature>
        <INSDFeature_key>CDS</INSDFeature_key>
        <INSDFeature_location>join(AF149238.1:46..430,AF149239.1:83..251,AF149240.1:132..297,AF149241.1:171..410,164..301)</INSDFeature_location>
        <INSDFeature_intervals>
          <INSDInterval>
            <INSDInterval_from>46</INSDInterval_from>
            <INSDInterval_to>430</INSDInterval_to>
            <INSDInterval_accession>AF149238.1</INSDInterval_accession>
          </INSDInterval>
          <INSDInterval>
            <INSDInterval_from>83</INSDInterval_from>
            <INSDInterval_to>251</INSDInterval_to>
            <INSDInterval_accession>AF149239.1</INSDInterval_accession>
          </INSDInterval>
          <INSDInterval>
            <INSDInterval_from>132</INSDInterval_from>
            <INSDInterval_to>297</INSDInterval_to>
            <INSDInterval_accession>AF149240.1</INSDInterval_accession>
          </INSDInterval>
          <INSDInterval>
            <INSDInterval_from>171</INSDInterval_from>
            <INSDInterval_to>410</INSDInterval_to>
            <INSDInterval_accession>AF149241.1</INSDInterval_accession>
          </INSDInterval>
          <INSDInterval>
            <INSDInterval_from>164</INSDInterval_from>
            <INSDInterval_to>301</INSDInterval_to>
            <INSDInterval_accession>AF149242.1</INSDInterval_accession>
          </INSDInterval>
        </INSDFeature_intervals>
        <INSDFeature_operator>join</INSDFeature_operator>
        <INSDFeature_quals>
          <INSDQualifier>
            <INSDQualifier_name>gene</INSDQualifier_name>
            <INSDQualifier_value>sws2</INSDQualifier_value>
          </INSDQualifier>
          <INSDQualifier>
            <INSDQualifier_name>codon_start</INSDQualifier_name>
            <INSDQualifier_value>1</INSDQualifier_value>
          </INSDQualifier>
          <INSDQualifier>
            <INSDQualifier_name>transl_table</INSDQualifier_name>
            <INSDQualifier_value>1</INSDQualifier_value>
          </INSDQualifier>
          <INSDQualifier>
            <INSDQualifier_name>product</INSDQualifier_name>
            <INSDQualifier_value>SWS2 opsin</INSDQualifier_value>
          </INSDQualifier>
          <INSDQualifier>
            <INSDQualifier_name>protein_id</INSDQualifier_name>
            <INSDQualifier_value>AAD38035.1</INSDQualifier_value>
          </INSDQualifier>
          <INSDQualifier>
            <INSDQualifier_name>db_xref</INSDQualifier_name>
            <INSDQualifier_value>GI:5020192</INSDQualifier_value>
          </INSDQualifier>
          <INSDQualifier>
            <INSDQualifier_name>translation</INSDQualifier_name>
            <INSDQualifier_value>MQRAREARDELPDDFYIPMALDAPNLTALSPFLVPQTHLGSPGVFRGMAAFMLALIALGGPINALTIACTARYKKLRSHLNYILVNLAAANLLVICVGSTTAFYSFSQMYFALGPTACKIEGFAATLGGMVSLWSLAVVAFERFLVICKPLGNFTFRGSHAVLGCAATWIFGLVAAVPPLFGWSRYIPEGLQCSCGPDWYTANNKWNNESYVIFLFCFCFGVPLALIVFSYGRLLLTLRAVARQQEQSASTQKAEREVTKMVVVMVLGFLVCWAPYSAFALWVVTHRGRPFDVGLASIPSVFSKASTVYNPVIYVFMNKQFRSCMLKLLFCGRSPFGDEDDVSGSSQATQVSSVGSASASQVAPA</INSDQualifier_value>
          </INSDQualifier>
        </INSDFeature_quals>
      </INSDFeature>
      <INSDFeature>
        <INSDFeature_key>exon</INSDFeature_key>
        <INSDFeature_location>164..&gt;301</INSDFeature_location>
        <INSDFeature_intervals>
          <INSDInterval>
            <INSDInterval_from>164</INSDInterval_from>
            <INSDInterval_to>301</INSDInterval_to>
            <INSDInterval_accession>AF149242.1</INSDInterval_accession>
          </INSDInterval>
        </INSDFeature_intervals>
        <INSDFeature_partial3 value="true" />
        <INSDFeature_quals>
          <INSDQualifier>
            <INSDQualifier_name>gene</INSDQualifier_name>
            <INSDQualifier_value>sws2</INSDQualifier_value>
          </INSDQualifier>
          <INSDQualifier>
            <INSDQualifier_name>number</INSDQualifier_name>
            <INSDQualifier_value>5</INSDQualifier_value>
          </INSDQualifier>
        </INSDFeature_quals>
      </INSDFeature>
    </INSDSeq_feature-table>
    <INSDSeq_sequence>atgtccgcagttccgctcgtgcatgctgaagctgctgttccgcggggacagtgacgtcatggggtgtgtgatgtcatagggtgtgtgtgatgtcacagtgtgtgtgtgtgtgtgtgacgtcacagccgtggtgctgacgtcacggtgacgtcacgtcccgcagttccgctcgtgcatgctgaagctgctgttctgcgggcgcagcccgttcggggacgaggacgacgtgtcgggctcctcccaggccacccaggtgtcctccgtgggctccgcctccgccagccaggtggccccggcataggacccacggccacctctgccccacggcgaccgctgccccacggcgacctctgccccacggcaccgacccacggcgacctctgccccacggcaccgacccacggagacctctgccccacggcgacctctg</INSDSeq_sequence>
  </INSDSeq>
</INSDSet>